For ode45:
The general syntax is ode45('func', [tmin,tmax], [x0, y0]),func.m, tmin and tmax are the minimum and maximum values of time you want, and [x0, y0] are the initial conditions at tmin. Don't forget the quotes around func. It's also possible to do this for systems of dimensions higher and 2.
While the command above will give you a plot, you can extract the numerical data via [t,vars] = ode45('func', [tmin,tmax], [x0, y0]).[tn, [xn, yn]]. Then you can do plot(t,x(:,1)) to just plot the x's versus time, for example.
The script func.m should define a function that takes t and vars as input, where vars is a list containing the current values of your variables, and returns another list containing the current values of the derivatives of your variables.
The example I did in class is available here. Try downloading this and running ode45('predatorprey', [0, 60], [250, 30]).